Class: AlphaBetaTCR

URI: GO:0042105

classDiagram class AlphaBetaTCR click AlphaBetaTCR href "../AlphaBetaTCR" TCellReceptor <|-- AlphaBetaTCR click TCellReceptor href "../TCellReceptor" AlphaBetaTCR <|-- ReceptorComposite click ReceptorComposite href "../ReceptorComposite" AlphaBetaTCR <|-- AlphaBetaReceptorComposite click AlphaBetaReceptorComposite href "../AlphaBetaReceptorComposite" AlphaBetaTCR : akc_id AlphaBetaTCR : paired_chain AlphaBetaTCR : species AlphaBetaTCR --> "0..1" SpeciesOntology : species click SpeciesOntology href "../SpeciesOntology" AlphaBetaTCR : tra_chain AlphaBetaTCR : trb_chain

Inheritance

AKObject
- ImmuneReceptor
  - TCellReceptor
    - AlphaBetaTCR

Slots

Name	Cardinality and Range	Description	Inheritance
tra_chain	0..1 Uriorcurie	T cell receptor alpha chain	direct
trb_chain	0..1 Uriorcurie	T cell receptor beta chain	direct
species	0..1 SpeciesOntology	Binomial designation of subject's species	ImmuneReceptor
paired_chain	0..1 Boolean	Flag to indicate the receptor object has both chains defined	ImmuneReceptor
akc_id	1 Uriorcurie	A unique identifier for a thing in the AKC	AKObject

Usages

used by	used in	type	used
AIRRKnowledgeCommons	ab_tcell_receptors	range	AlphaBetaTCR
TCRpMHCComplex	ab_tcr	range	AlphaBetaTCR

Identifier and Mapping Information

Schema Source

from schema: https://github.com/airr-knowledge/ak-schema

Mappings

Mapping Type	Mapped Value
self	GO:0042105
native	ak_schema:AlphaBetaTCR

LinkML Source

Direct

name: AlphaBetaTCR
from_schema: https://github.com/airr-knowledge/ak-schema
is_a: TCellReceptor
slots:
- tra_chain
- trb_chain
class_uri: GO:0042105

Induced

name: AlphaBetaTCR
from_schema: https://github.com/airr-knowledge/ak-schema
is_a: TCellReceptor
attributes:
  tra_chain:
    name: tra_chain
    description: T cell receptor alpha chain
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: tra_chain
    owner: AlphaBetaTCR
    domain_of:
    - AlphaBetaTCR
    - QueryAlphaBetaTCR
    range: uriorcurie
  trb_chain:
    name: trb_chain
    description: T cell receptor beta chain
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: trb_chain
    owner: AlphaBetaTCR
    domain_of:
    - AlphaBetaTCR
    - QueryAlphaBetaTCR
    range: uriorcurie
  species:
    name: species
    annotations:
      nullable:
        tag: nullable
        value: false
    description: Binomial designation of subject's species
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: species
    owner: AlphaBetaTCR
    domain_of:
    - Participant
    - Chain
    - ImmuneReceptor
    - AntibodyAntigenComplex
    - TCRpMHCComplex
    - ReceptorComposite
    - AlphaBetaReceptorComposite
    - GammaDeltaReceptorComposite
    - BCellReceptorComposite
    - AlleleDescription
    - GermlineSet
    - Subject
    range: SpeciesOntology
  paired_chain:
    name: paired_chain
    description: Flag to indicate the receptor object has both chains defined
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: paired_chain
    owner: AlphaBetaTCR
    domain_of:
    - ImmuneReceptor
    range: boolean
  akc_id:
    name: akc_id
    description: A unique identifier for a thing in the AKC.
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    alias: akc_id
    owner: AlphaBetaTCR
    domain_of:
    - AKObject
    range: uriorcurie
    required: true
class_uri: GO:0042105