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Class: ImmuneReceptor

  • NOTE: this is an abstract class and should not be instantiated directly

URI: ak_schema:ImmuneReceptor

classDiagram class ImmuneReceptor click ImmuneReceptor href "../ImmuneReceptor" AKObject <|-- ImmuneReceptor click AKObject href "../AKObject" ImmuneReceptor <|-- TCellReceptor click TCellReceptor href "../TCellReceptor" ImmuneReceptor <|-- BCellReceptor click BCellReceptor href "../BCellReceptor" ImmuneReceptor : akc_id ImmuneReceptor : paired_chain ImmuneReceptor : species ImmuneReceptor --> "0..1" SpeciesOntology : species click SpeciesOntology href "../SpeciesOntology"

Inheritance

Slots

Name Cardinality and Range Description Inheritance
species 0..1
SpeciesOntology		 Binomial designation of subject's species direct
paired_chain 0..1
Boolean		 Flag to indicate the receptor object has both chains defined direct
akc_id 1
Uriorcurie		 A unique identifier for a thing in the AKC AKObject

Identifier and Mapping Information

Schema Source

  • from schema: https://github.com/airr-knowledge/ak-schema

Mappings

Mapping Type Mapped Value
self ak_schema:ImmuneReceptor
native ak_schema:ImmuneReceptor

LinkML Source

Direct

name: ImmuneReceptor
from_schema: https://github.com/airr-knowledge/ak-schema
is_a: AKObject
abstract: true
slots:
- species
- paired_chain

Induced

name: ImmuneReceptor
from_schema: https://github.com/airr-knowledge/ak-schema
is_a: AKObject
abstract: true
attributes:
  species:
    name: species
    annotations:
      nullable:
        tag: nullable
        value: false
    description: Binomial designation of subject's species
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: species
    owner: ImmuneReceptor
    domain_of:
    - Participant
    - Chain
    - ImmuneReceptor
    - AntibodyAntigenComplex
    - TCRpMHCComplex
    - ReceptorComposite
    - AlphaBetaReceptorComposite
    - GammaDeltaReceptorComposite
    - BCellReceptorComposite
    - AlleleDescription
    - GermlineSet
    - Subject
    range: SpeciesOntology
  paired_chain:
    name: paired_chain
    description: Flag to indicate the receptor object has both chains defined
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: paired_chain
    owner: ImmuneReceptor
    domain_of:
    - ImmuneReceptor
    range: boolean
  akc_id:
    name: akc_id
    description: A unique identifier for a thing in the AKC.
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    alias: akc_id
    owner: ImmuneReceptor
    domain_of:
    - AKObject
    range: uriorcurie
    required: true