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Class: QueryAlphaBetaTCR

URI: ak_schema:QueryAlphaBetaTCR

classDiagram class QueryAlphaBetaTCR click QueryAlphaBetaTCR href "../QueryAlphaBetaTCR" TCellReceptor <|-- QueryAlphaBetaTCR click TCellReceptor href "../TCellReceptor" QueryAlphaBetaTCR : akc_id QueryAlphaBetaTCR : paired_chain QueryAlphaBetaTCR : species QueryAlphaBetaTCR --> "0..1" SpeciesOntology : species click SpeciesOntology href "../SpeciesOntology" QueryAlphaBetaTCR : tra_chain QueryAlphaBetaTCR --> "0..1" Chain : tra_chain click Chain href "../Chain" QueryAlphaBetaTCR : trb_chain QueryAlphaBetaTCR --> "0..1" Chain : trb_chain click Chain href "../Chain"

Inheritance

Slots

Name Cardinality and Range Description Inheritance
tra_chain 0..1
Chain		 direct
trb_chain 0..1
Chain		 direct
species 0..1
SpeciesOntology		 Binomial designation of subject's species ImmuneReceptor
paired_chain 0..1
Boolean		 Flag to indicate the receptor object has both chains defined ImmuneReceptor
akc_id 1
Uriorcurie		 A unique identifier for a thing in the AKC AKObject

Identifier and Mapping Information

Schema Source

  • from schema: https://github.com/airr-knowledge/ak-schema

Mappings

Mapping Type Mapped Value
self ak_schema:QueryAlphaBetaTCR
native ak_schema:QueryAlphaBetaTCR

LinkML Source

Direct

name: QueryAlphaBetaTCR
from_schema: https://github.com/airr-knowledge/ak-schema
is_a: TCellReceptor
attributes:
  tra_chain:
    name: tra_chain
    from_schema: https://github.com/airr-knowledge/ak-schema
    domain_of:
    - AlphaBetaTCR
    - QueryAlphaBetaTCR
    range: Chain
    multivalued: false
    inlined: true
  trb_chain:
    name: trb_chain
    from_schema: https://github.com/airr-knowledge/ak-schema
    domain_of:
    - AlphaBetaTCR
    - QueryAlphaBetaTCR
    range: Chain
    multivalued: false
    inlined: true

Induced

name: QueryAlphaBetaTCR
from_schema: https://github.com/airr-knowledge/ak-schema
is_a: TCellReceptor
attributes:
  tra_chain:
    name: tra_chain
    from_schema: https://github.com/airr-knowledge/ak-schema
    alias: tra_chain
    owner: QueryAlphaBetaTCR
    domain_of:
    - AlphaBetaTCR
    - QueryAlphaBetaTCR
    range: Chain
    multivalued: false
    inlined: true
  trb_chain:
    name: trb_chain
    from_schema: https://github.com/airr-knowledge/ak-schema
    alias: trb_chain
    owner: QueryAlphaBetaTCR
    domain_of:
    - AlphaBetaTCR
    - QueryAlphaBetaTCR
    range: Chain
    multivalued: false
    inlined: true
  species:
    name: species
    annotations:
      nullable:
        tag: nullable
        value: false
    description: Binomial designation of subject's species
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: species
    owner: QueryAlphaBetaTCR
    domain_of:
    - Participant
    - Chain
    - ImmuneReceptor
    - AntibodyAntigenComplex
    - TCRpMHCComplex
    - ReceptorComposite
    - AlphaBetaReceptorComposite
    - GammaDeltaReceptorComposite
    - BCellReceptorComposite
    - AlleleDescription
    - GermlineSet
    - Subject
    range: SpeciesOntology
  paired_chain:
    name: paired_chain
    description: Flag to indicate the receptor object has both chains defined
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: paired_chain
    owner: QueryAlphaBetaTCR
    domain_of:
    - ImmuneReceptor
    range: boolean
  akc_id:
    name: akc_id
    description: A unique identifier for a thing in the AKC.
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    alias: akc_id
    owner: QueryAlphaBetaTCR
    domain_of:
    - AKObject
    range: uriorcurie
    required: true