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Class: AIRRSequenceAnnotationData

annotated VDJ sequence data

URI: ak_schema:AIRRSequenceAnnotationData

classDiagram class AIRRSequenceAnnotationData click AIRRSequenceAnnotationData href "../AIRRSequenceAnnotationData" AKDataItem <|-- AIRRSequenceAnnotationData click AKDataItem href "../AKDataItem" AIRRSequenceAnnotationData : akc_id AIRRSequenceAnnotationData : data_item_types AIRRSequenceAnnotationData --> "*" DataItemTypeEnum : data_item_types click DataItemTypeEnum href "../DataItemTypeEnum" AIRRSequenceAnnotationData : type

Inheritance

Slots

Name Cardinality and Range Description Inheritance
type 0..1
String		 AKDataItem
data_item_types *
DataItemTypeEnum		 semantic types of the data AKDataItem
akc_id 1
Uriorcurie		 A unique identifier for a thing in the AKC AKObject

Identifier and Mapping Information

Schema Source

  • from schema: https://github.com/airr-knowledge/ak-schema

Mappings

Mapping Type Mapped Value
self ak_schema:AIRRSequenceAnnotationData
native ak_schema:AIRRSequenceAnnotationData

LinkML Source

Direct

name: AIRRSequenceAnnotationData
description: annotated VDJ sequence data
from_schema: https://github.com/airr-knowledge/ak-schema
is_a: AKDataItem

Induced

name: AIRRSequenceAnnotationData
description: annotated VDJ sequence data
from_schema: https://github.com/airr-knowledge/ak-schema
is_a: AKDataItem
attributes:
  type:
    name: type
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    designates_type: true
    alias: type
    owner: AIRRSequenceAnnotationData
    domain_of:
    - LifeEvent
    - Assay
    - AKDataItem
    - TCellReceptor
    - Epitope
    range: string
  data_item_types:
    name: data_item_types
    description: semantic types of the data
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: data_item_types
    owner: AIRRSequenceAnnotationData
    domain_of:
    - AKDataItem
    range: DataItemTypeEnum
    multivalued: true
  akc_id:
    name: akc_id
    description: A unique identifier for a thing in the AKC.
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    alias: akc_id
    owner: AIRRSequenceAnnotationData
    domain_of:
    - AKObject
    range: uriorcurie
    required: true