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Slot: j_germline_alignment

Aligned J gene germline sequence spanning the same region as the j_sequence_alignment field and including the same set of corrections and spacers (if any).

URI: ak_schema:j_germline_alignment

Applicable Classes

Name Description Modifies Slot
Rearrangement no

Properties

Identifier and Mapping Information

Annotations

property value
nullable True

Schema Source

  • from schema: https://github.com/airr-knowledge/ak-schema

Mappings

Mapping Type Mapped Value
self ak_schema:j_germline_alignment
native ak_schema:j_germline_alignment

LinkML Source

name: j_germline_alignment
annotations:
  nullable:
    tag: nullable
    value: true
description: Aligned J gene germline sequence spanning the same region as the j_sequence_alignment
  field and including the same set of corrections and spacers (if any).
from_schema: https://github.com/airr-knowledge/ak-schema
rank: 1000
alias: j_germline_alignment
domain_of:
- Rearrangement
range: string