Slot: j_codon_frame

Codon position of the first nucleotide in the 'coding_sequence' field. Mandatory for J genes. Not used for V or D genes. '1' means the sequence is in-frame, '2' means that the first bp is missing from the first codon, and '3' means that the first 2 bp are missing.

URI: ak_schema:j_codon_frame

Applicable Classes

Name	Description	Modifies Slot
AlleleDescription		no

Properties

• Range: JCodonFrameEnum

Identifier and Mapping Information

Annotations

property	value
nullable	True

Schema Source

• from schema: https://github.com/airr-knowledge/ak-schema

Mappings

Mapping Type	Mapped Value
self	ak_schema:j_codon_frame
native	ak_schema:j_codon_frame

LinkML Source

name: j_codon_frame
annotations:
  nullable:
    tag: nullable
    value: true
description: Codon position of the first nucleotide in the 'coding_sequence' field.
  Mandatory for J genes.  Not used for V or D genes. '1' means the sequence is in-frame,
  '2' means that the first bp is  missing from the first codon, and '3' means that
  the first 2 bp are missing.
from_schema: https://github.com/airr-knowledge/ak-schema
rank: 1000
alias: j_codon_frame
domain_of:
- AlleleDescription
range: JCodonFrameEnum