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Class: SpecimenProcessing

URI: OBI:0000094

classDiagram class SpecimenProcessing click SpecimenProcessing href "../SpecimenProcessing" PlannedProcess <|-- SpecimenProcessing click PlannedProcess href "../PlannedProcess" SpecimenProcessing <|-- CellIsolationProcessing click CellIsolationProcessing href "../CellIsolationProcessing" SpecimenProcessing <|-- LibraryPreparationProcessing click LibraryPreparationProcessing href "../LibraryPreparationProcessing" SpecimenProcessing : akc_id SpecimenProcessing : description SpecimenProcessing : name SpecimenProcessing : specimen SpecimenProcessing --> "0..1" Specimen : specimen click Specimen href "../Specimen"

Inheritance

Slots

Name Cardinality and Range Description Inheritance
specimen 0..1
Specimen		 The specimen that was input for an assay direct
name 0..1
String		 A human-readable name for a thing NamedThing
description 0..1
String		 A human-readable description for a thing NamedThing
akc_id 1
Uriorcurie		 A unique identifier for a thing in the AKC AKObject

Usages

used by used in type used
AIRRKnowledgeCommons specimen_processings range SpecimenProcessing
Assay specimen_processing range SpecimenProcessing
AIRRSequencingAssay specimen_processing range SpecimenProcessing
TCellReceptorEpitopeBindingAssay specimen_processing range SpecimenProcessing

Identifier and Mapping Information

Schema Source

  • from schema: https://github.com/airr-knowledge/ak-schema

Mappings

Mapping Type Mapped Value
self OBI:0000094
native ak_schema:SpecimenProcessing

LinkML Source

Direct

name: SpecimenProcessing
from_schema: https://github.com/airr-knowledge/ak-schema
is_a: PlannedProcess
slots:
- specimen
class_uri: OBI:0000094

Induced

name: SpecimenProcessing
from_schema: https://github.com/airr-knowledge/ak-schema
is_a: PlannedProcess
attributes:
  specimen:
    name: specimen
    description: The specimen that was input for an assay
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    slot_uri: OBI:0000293
    alias: specimen
    owner: SpecimenProcessing
    domain_of:
    - SpecimenCollection
    - SpecimenProcessing
    - Assay
    range: Specimen
  name:
    name: name
    description: A human-readable name for a thing
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    slot_uri: schema:name
    alias: name
    owner: SpecimenProcessing
    domain_of:
    - NamedThing
    range: string
  description:
    name: description
    description: A human-readable description for a thing
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    slot_uri: schema:description
    alias: description
    owner: SpecimenProcessing
    domain_of:
    - NamedThing
    range: string
  akc_id:
    name: akc_id
    description: A unique identifier for a thing in the AKC.
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    alias: akc_id
    owner: SpecimenProcessing
    domain_of:
    - AKObject
    range: uriorcurie
    required: true
class_uri: OBI:0000094