Class: SequenceData

sequence data items are given an akc_id

classDiagram class SequenceData click SequenceData href "../SequenceData" AKDataItem <|-- SequenceData click AKDataItem href "../AKDataItem" SequenceData <|-- AIRRSequencingData click AIRRSequencingData href "../AIRRSequencingData" SequenceData <|-- RNATranscriptomeData click RNATranscriptomeData href "../RNATranscriptomeData" SequenceData : akc_id SequenceData : data_item_types SequenceData --> "*" DataItemTypeEnum : data_item_types click DataItemTypeEnum href "../DataItemTypeEnum" SequenceData : type

Inheritance

AKObject
- AKDataItem
  - SequenceData
    - AIRRSequencingData [ SequencingData]
    - RNATranscriptomeData

Slots

Name	Cardinality and Range	Description	Inheritance
type	0..1 String		AKDataItem
data_item_types	* DataItemTypeEnum	semantic types of the data	AKDataItem
akc_id	1 Uriorcurie	A unique identifier for a thing in the AKC	AKObject

Usages

used by	used in	type	used
AIRRKnowledgeCommons	sequence_data	range	SequenceData

Identifier and Mapping Information

Schema Source

from schema: https://github.com/airr-knowledge/ak-schema

Mappings

Mapping Type	Mapped Value
self	OBI:0000973
native	ak_schema:SequenceData

LinkML Source

Direct

name: SequenceData
description: sequence data items are given an akc_id
from_schema: https://github.com/airr-knowledge/ak-schema
is_a: AKDataItem
class_uri: OBI:0000973

Induced

name: SequenceData
description: sequence data items are given an akc_id
from_schema: https://github.com/airr-knowledge/ak-schema
is_a: AKDataItem
attributes:
  type:
    name: type
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    designates_type: true
    alias: type
    owner: SequenceData
    domain_of:
    - LifeEvent
    - Assay
    - AKDataItem
    - TCellReceptor
    - Epitope
    range: string
  data_item_types:
    name: data_item_types
    description: semantic types of the data
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: data_item_types
    owner: SequenceData
    domain_of:
    - AKDataItem
    range: DataItemTypeEnum
    multivalued: true
  akc_id:
    name: akc_id
    description: A unique identifier for a thing in the AKC.
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    alias: akc_id
    owner: SequenceData
    domain_of:
    - AKObject
    range: uriorcurie
    required: true
class_uri: OBI:0000973