Class: Participant

A participant in an investigation.

classDiagram class Participant NamedThing <|-- Participant Participant : age Participant : age_event Participant --> LifeEvent : age_event Participant : age_unit Participant : akc_id Participant : biological_sex Participant --> BiologicalSex : biological_sex Participant : description Participant : ethnicity Participant --> Ethnicity : ethnicity Participant : geolocation Participant --> Geolocation : geolocation Participant : name Participant : phenotypic_sex Participant --> PhenotypicSex : phenotypic_sex Participant : race Participant --> Race : race Participant : species Participant --> Species : species Participant : strain Participant --> Strain : strain Participant : study_arm Participant --> StudyArm : study_arm

Inheritance

AKObject
- NamedThing
  - Participant

Slots

Name	Cardinality and Range	Description	Inheritance
study_arm	0..1 StudyArm	The study arm that a participant is a member of	direct
species	0..1 Species	The species of a participant	direct
biological_sex	0..1 BiologicalSex	The biological sex of a participant	direct
phenotypic_sex	0..1 PhenotypicSex	The phenotypic sex of a participant	direct
age	0..1 String	The age of a participant relative to age_event	direct
age_unit	0..1 String	Units used to describe the age	direct
age_event	0..1 LifeEvent	The event to which the age is relative	direct
race	0..1 Race	The race of a participant	direct
ethnicity	0..1 Ethnicity	The ethnicity of a participant	direct
geolocation	0..1 Geolocation	The geolocation of a participant at birth	direct
strain	0..1 Strain	The strain of the participant (non-human study participants)	direct
name	0..1 String	A human-readable name for a thing	NamedThing
description	0..1 String	A human-readable description for a thing	NamedThing
akc_id	1..1 Uriorcurie	A unique identifier for a thing in the AKC	AKObject

Usages

used by	used in	type	used
Investigation	participants	range	Participant
LifeEvent	participant	range	Participant
AIRRKnowledgeCommons	participants	range	Participant

Identifier and Mapping Information

Schema Source

from schema: https://github.com/airr-knowledge/ak-schema

Mappings

Mapping Type	Mapped Value
self	OBI:0100026
native	ak_schema:Participant

LinkML Source

Direct

name: Participant
description: A participant in an investigation.
from_schema: https://github.com/airr-knowledge/ak-schema
is_a: NamedThing
slots:
- study_arm
- species
- biological_sex
- phenotypic_sex
- age
- age_unit
- age_event
- race
- ethnicity
- geolocation
- strain
class_uri: OBI:0100026

Induced

name: Participant
description: A participant in an investigation.
from_schema: https://github.com/airr-knowledge/ak-schema
is_a: NamedThing
attributes:
  study_arm:
    name: study_arm
    description: The study arm that a participant is a member of
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    slot_uri: RO:0002350
    alias: study_arm
    owner: Participant
    domain_of:
    - Participant
    range: StudyArm
  species:
    name: species
    description: The species of a participant
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    slot_uri: rdf:type
    alias: species
    owner: Participant
    domain_of:
    - Participant
    range: Species
  biological_sex:
    name: biological_sex
    description: The biological sex of a participant
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    slot_uri: RO:0000053
    alias: biological_sex
    owner: Participant
    domain_of:
    - Participant
    range: BiologicalSex
  phenotypic_sex:
    name: phenotypic_sex
    description: The phenotypic sex of a participant
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    slot_uri: RO:0000053
    alias: phenotypic_sex
    owner: Participant
    domain_of:
    - Participant
    range: PhenotypicSex
  age:
    name: age
    description: The age of a participant relative to age_event
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: age
    owner: Participant
    domain_of:
    - Participant
    range: string
  age_unit:
    name: age_unit
    description: Units used to describe the age
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: age_unit
    owner: Participant
    domain_of:
    - Participant
    range: string
  age_event:
    name: age_event
    description: The event to which the age is relative
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: age_event
    owner: Participant
    domain_of:
    - Participant
    range: LifeEvent
  race:
    name: race
    description: The race of a participant
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: race
    owner: Participant
    domain_of:
    - Participant
    range: Race
  ethnicity:
    name: ethnicity
    description: The ethnicity of a participant
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: ethnicity
    owner: Participant
    domain_of:
    - Participant
    range: Ethnicity
  geolocation:
    name: geolocation
    description: The geolocation of a participant at birth
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    slot_uri: RO:0001025
    alias: geolocation
    owner: Participant
    domain_of:
    - Participant
    - LifeEvent
    range: Geolocation
  strain:
    name: strain
    description: The strain of the participant (non-human study participants)
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: strain
    owner: Participant
    domain_of:
    - Participant
    range: Strain
  name:
    name: name
    description: A human-readable name for a thing
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    slot_uri: schema:name
    alias: name
    owner: Participant
    domain_of:
    - NamedThing
    range: string
  description:
    name: description
    description: A human-readable description for a thing
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    slot_uri: schema:description
    alias: description
    owner: Participant
    domain_of:
    - NamedThing
    range: string
  akc_id:
    name: akc_id
    description: A unique identifier for a thing in the AKC.
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    alias: akc_id
    owner: Participant
    domain_of:
    - AKObject
    range: uriorcurie
    required: true
class_uri: OBI:0100026