Enum: DataTransformationTypeEnum

Permissible Values

Value	Meaning	Description
merge_reads	None
barcode_matching	None
primer_matching	None
length_filter	None
quality_filter	None
homopolymer_filter	None
collapse_unique_sequences	None
vdj_annotation	None
clonal_assignment	None
germline_allele_inference	None
genotype_inference	None
gene_usage	None
gene_combo_usage	None
length_distribution	None
diversity	None
observed_mutations	None

Slots

Name	Description
data_transformation_types	semantic types of the data transformation

Identifier and Mapping Information

Schema Source

from schema: https://github.com/airr-knowledge/ak-schema

LinkML Source

name: DataTransformationTypeEnum
from_schema: https://github.com/airr-knowledge/ak-schema
rank: 1000
permissible_values:
  merge_reads:
    text: merge_reads
  barcode_matching:
    text: barcode_matching
  primer_matching:
    text: primer_matching
  length_filter:
    text: length_filter
  quality_filter:
    text: quality_filter
  homopolymer_filter:
    text: homopolymer_filter
  collapse_unique_sequences:
    text: collapse_unique_sequences
  vdj_annotation:
    text: vdj_annotation
  clonal_assignment:
    text: clonal_assignment
  germline_allele_inference:
    text: germline_allele_inference
  genotype_inference:
    text: genotype_inference
  gene_usage:
    text: gene_usage
  gene_combo_usage:
    text: gene_combo_usage
  length_distribution:
    text: length_distribution
  diversity:
    text: diversity
  observed_mutations:
    text: observed_mutations