Class: AIRRKnowledgeCommons

A container for instances of multiple classes.

classDiagram class AIRRKnowledgeCommons click AIRRKnowledgeCommons href "../AIRRKnowledgeCommons" AIRRKnowledgeCommons : ab_tcell_receptors AIRRKnowledgeCommons --> "*" AlphaBetaTCR : ab_tcell_receptors click AlphaBetaTCR href "../AlphaBetaTCR" AIRRKnowledgeCommons : assays AIRRKnowledgeCommons --> "*" Assay : assays click Assay href "../Assay" AIRRKnowledgeCommons : assessments AIRRKnowledgeCommons --> "*" Assessment : assessments click Assessment href "../Assessment" AIRRKnowledgeCommons : bcell_receptors AIRRKnowledgeCommons --> "*" BCellReceptor : bcell_receptors click BCellReceptor href "../BCellReceptor" AIRRKnowledgeCommons : chains AIRRKnowledgeCommons --> "*" Chain : chains click Chain href "../Chain" AIRRKnowledgeCommons : conclusions AIRRKnowledgeCommons --> "*" Conclusion : conclusions click Conclusion href "../Conclusion" AIRRKnowledgeCommons : datasets AIRRKnowledgeCommons --> "*" Dataset : datasets click Dataset href "../Dataset" AIRRKnowledgeCommons : epitopes AIRRKnowledgeCommons --> "*" Epitope : epitopes click Epitope href "../Epitope" AIRRKnowledgeCommons : gd_tcell_receptors AIRRKnowledgeCommons --> "*" GammaDeltaTCR : gd_tcell_receptors click GammaDeltaTCR href "../GammaDeltaTCR" AIRRKnowledgeCommons : immune_exposures AIRRKnowledgeCommons --> "*" ImmuneExposure : immune_exposures click ImmuneExposure href "../ImmuneExposure" AIRRKnowledgeCommons : investigations AIRRKnowledgeCommons --> "*" Investigation : investigations click Investigation href "../Investigation" AIRRKnowledgeCommons : life_events AIRRKnowledgeCommons --> "*" LifeEvent : life_events click LifeEvent href "../LifeEvent" AIRRKnowledgeCommons : participants AIRRKnowledgeCommons --> "*" Participant : participants click Participant href "../Participant" AIRRKnowledgeCommons : references AIRRKnowledgeCommons --> "*" Reference : references click Reference href "../Reference" AIRRKnowledgeCommons : specimen_collections AIRRKnowledgeCommons --> "*" SpecimenCollection : specimen_collections click SpecimenCollection href "../SpecimenCollection" AIRRKnowledgeCommons : specimen_processings AIRRKnowledgeCommons --> "*" SpecimenProcessing : specimen_processings click SpecimenProcessing href "../SpecimenProcessing" AIRRKnowledgeCommons : specimens AIRRKnowledgeCommons --> "*" Specimen : specimens click Specimen href "../Specimen" AIRRKnowledgeCommons : study_arms AIRRKnowledgeCommons --> "*" StudyArm : study_arms click StudyArm href "../StudyArm" AIRRKnowledgeCommons : study_events AIRRKnowledgeCommons --> "*" StudyEvent : study_events click StudyEvent href "../StudyEvent"

Slots

Name	Cardinality and Range	Inheritance
investigations	* Investigation	direct
references	* Reference	direct
study_arms	* StudyArm	direct
study_events	* StudyEvent	direct
participants	* Participant	direct
life_events	* LifeEvent	direct
immune_exposures	* ImmuneExposure	direct
assessments	* Assessment	direct
specimens	* Specimen	direct
specimen_collections	* SpecimenCollection	direct
specimen_processings	* SpecimenProcessing	direct
assays	* Assay	direct
datasets	* Dataset	direct
conclusions	* Conclusion	direct
chains	* Chain	direct
ab_tcell_receptors	* AlphaBetaTCR	direct
gd_tcell_receptors	* GammaDeltaTCR	direct
bcell_receptors	* BCellReceptor	direct
epitopes	* Epitope	direct

Identifier and Mapping Information

Schema Source

from schema: https://github.com/airr-knowledge/ak-schema

Mappings

Mapping Type	Mapped Value
self	ak_schema:AIRRKnowledgeCommons
native	ak_schema:AIRRKnowledgeCommons

LinkML Source

Direct

name: AIRRKnowledgeCommons
description: A container for instances of multiple classes.
from_schema: https://github.com/airr-knowledge/ak-schema
attributes:
  investigations:
    name: investigations
    from_schema: https://github.com/airr-knowledge/ak-schema
    domain_of:
    - AIRRKnowledgeCommons
    - Reference
    - Conclusion
    range: Investigation
    multivalued: true
    inlined: true
  references:
    name: references
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    domain_of:
    - AIRRKnowledgeCommons
    range: Reference
    multivalued: true
    inlined: true
  study_arms:
    name: study_arms
    from_schema: https://github.com/airr-knowledge/ak-schema
    domain_of:
    - AIRRKnowledgeCommons
    - StudyEvent
    range: StudyArm
    multivalued: true
    inlined: true
  study_events:
    name: study_events
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    domain_of:
    - AIRRKnowledgeCommons
    range: StudyEvent
    multivalued: true
    inlined: true
  participants:
    name: participants
    from_schema: https://github.com/airr-knowledge/ak-schema
    domain_of:
    - AIRRKnowledgeCommons
    - Investigation
    range: Participant
    multivalued: true
    inlined: true
  life_events:
    name: life_events
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    domain_of:
    - AIRRKnowledgeCommons
    range: LifeEvent
    multivalued: true
    inlined: true
  immune_exposures:
    name: immune_exposures
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    domain_of:
    - AIRRKnowledgeCommons
    range: ImmuneExposure
    multivalued: true
    inlined: true
  assessments:
    name: assessments
    from_schema: https://github.com/airr-knowledge/ak-schema
    domain_of:
    - AIRRKnowledgeCommons
    - Dataset
    range: Assessment
    multivalued: true
    inlined: true
  specimens:
    name: specimens
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    domain_of:
    - AIRRKnowledgeCommons
    range: Specimen
    multivalued: true
    inlined: true
  specimen_collections:
    name: specimen_collections
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    domain_of:
    - AIRRKnowledgeCommons
    range: SpecimenCollection
    multivalued: true
    inlined: true
  specimen_processings:
    name: specimen_processings
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    domain_of:
    - AIRRKnowledgeCommons
    range: SpecimenProcessing
    multivalued: true
    inlined: true
  assays:
    name: assays
    from_schema: https://github.com/airr-knowledge/ak-schema
    domain_of:
    - AIRRKnowledgeCommons
    - Investigation
    - Dataset
    range: Assay
    multivalued: true
    inlined: true
  datasets:
    name: datasets
    from_schema: https://github.com/airr-knowledge/ak-schema
    domain_of:
    - AIRRKnowledgeCommons
    - Conclusion
    range: Dataset
    multivalued: true
    inlined: true
  conclusions:
    name: conclusions
    from_schema: https://github.com/airr-knowledge/ak-schema
    domain_of:
    - AIRRKnowledgeCommons
    - Investigation
    range: Conclusion
    multivalued: true
    inlined: true
  chains:
    name: chains
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    domain_of:
    - AIRRKnowledgeCommons
    range: Chain
    multivalued: true
    inlined: true
  ab_tcell_receptors:
    name: ab_tcell_receptors
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    domain_of:
    - AIRRKnowledgeCommons
    range: AlphaBetaTCR
    multivalued: true
    inlined: true
  gd_tcell_receptors:
    name: gd_tcell_receptors
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    domain_of:
    - AIRRKnowledgeCommons
    range: GammaDeltaTCR
    multivalued: true
    inlined: true
  bcell_receptors:
    name: bcell_receptors
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    domain_of:
    - AIRRKnowledgeCommons
    range: BCellReceptor
    multivalued: true
    inlined: true
  epitopes:
    name: epitopes
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    domain_of:
    - AIRRKnowledgeCommons
    range: Epitope
    multivalued: true
    inlined: true
tree_root: true

Induced

name: AIRRKnowledgeCommons
description: A container for instances of multiple classes.
from_schema: https://github.com/airr-knowledge/ak-schema
attributes:
  investigations:
    name: investigations
    from_schema: https://github.com/airr-knowledge/ak-schema
    alias: investigations
    owner: AIRRKnowledgeCommons
    domain_of:
    - AIRRKnowledgeCommons
    - Reference
    - Conclusion
    range: Investigation
    multivalued: true
    inlined: true
  references:
    name: references
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: references
    owner: AIRRKnowledgeCommons
    domain_of:
    - AIRRKnowledgeCommons
    range: Reference
    multivalued: true
    inlined: true
  study_arms:
    name: study_arms
    from_schema: https://github.com/airr-knowledge/ak-schema
    alias: study_arms
    owner: AIRRKnowledgeCommons
    domain_of:
    - AIRRKnowledgeCommons
    - StudyEvent
    range: StudyArm
    multivalued: true
    inlined: true
  study_events:
    name: study_events
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: study_events
    owner: AIRRKnowledgeCommons
    domain_of:
    - AIRRKnowledgeCommons
    range: StudyEvent
    multivalued: true
    inlined: true
  participants:
    name: participants
    from_schema: https://github.com/airr-knowledge/ak-schema
    alias: participants
    owner: AIRRKnowledgeCommons
    domain_of:
    - AIRRKnowledgeCommons
    - Investigation
    range: Participant
    multivalued: true
    inlined: true
  life_events:
    name: life_events
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: life_events
    owner: AIRRKnowledgeCommons
    domain_of:
    - AIRRKnowledgeCommons
    range: LifeEvent
    multivalued: true
    inlined: true
  immune_exposures:
    name: immune_exposures
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: immune_exposures
    owner: AIRRKnowledgeCommons
    domain_of:
    - AIRRKnowledgeCommons
    range: ImmuneExposure
    multivalued: true
    inlined: true
  assessments:
    name: assessments
    from_schema: https://github.com/airr-knowledge/ak-schema
    alias: assessments
    owner: AIRRKnowledgeCommons
    domain_of:
    - AIRRKnowledgeCommons
    - Dataset
    range: Assessment
    multivalued: true
    inlined: true
  specimens:
    name: specimens
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: specimens
    owner: AIRRKnowledgeCommons
    domain_of:
    - AIRRKnowledgeCommons
    range: Specimen
    multivalued: true
    inlined: true
  specimen_collections:
    name: specimen_collections
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: specimen_collections
    owner: AIRRKnowledgeCommons
    domain_of:
    - AIRRKnowledgeCommons
    range: SpecimenCollection
    multivalued: true
    inlined: true
  specimen_processings:
    name: specimen_processings
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: specimen_processings
    owner: AIRRKnowledgeCommons
    domain_of:
    - AIRRKnowledgeCommons
    range: SpecimenProcessing
    multivalued: true
    inlined: true
  assays:
    name: assays
    from_schema: https://github.com/airr-knowledge/ak-schema
    alias: assays
    owner: AIRRKnowledgeCommons
    domain_of:
    - AIRRKnowledgeCommons
    - Investigation
    - Dataset
    range: Assay
    multivalued: true
    inlined: true
  datasets:
    name: datasets
    from_schema: https://github.com/airr-knowledge/ak-schema
    alias: datasets
    owner: AIRRKnowledgeCommons
    domain_of:
    - AIRRKnowledgeCommons
    - Conclusion
    range: Dataset
    multivalued: true
    inlined: true
  conclusions:
    name: conclusions
    from_schema: https://github.com/airr-knowledge/ak-schema
    alias: conclusions
    owner: AIRRKnowledgeCommons
    domain_of:
    - AIRRKnowledgeCommons
    - Investigation
    range: Conclusion
    multivalued: true
    inlined: true
  chains:
    name: chains
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: chains
    owner: AIRRKnowledgeCommons
    domain_of:
    - AIRRKnowledgeCommons
    range: Chain
    multivalued: true
    inlined: true
  ab_tcell_receptors:
    name: ab_tcell_receptors
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: ab_tcell_receptors
    owner: AIRRKnowledgeCommons
    domain_of:
    - AIRRKnowledgeCommons
    range: AlphaBetaTCR
    multivalued: true
    inlined: true
  gd_tcell_receptors:
    name: gd_tcell_receptors
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: gd_tcell_receptors
    owner: AIRRKnowledgeCommons
    domain_of:
    - AIRRKnowledgeCommons
    range: GammaDeltaTCR
    multivalued: true
    inlined: true
  bcell_receptors:
    name: bcell_receptors
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: bcell_receptors
    owner: AIRRKnowledgeCommons
    domain_of:
    - AIRRKnowledgeCommons
    range: BCellReceptor
    multivalued: true
    inlined: true
  epitopes:
    name: epitopes
    from_schema: https://github.com/airr-knowledge/ak-schema
    rank: 1000
    alias: epitopes
    owner: AIRRKnowledgeCommons
    domain_of:
    - AIRRKnowledgeCommons
    range: Epitope
    multivalued: true
    inlined: true
tree_root: true